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Arabidopsis
and Plant Disease Resistance

Methodology

Arabidopsis thaliana, a small flowering plant that is a member of the mustard family, has become widely used as a model organism for the study of the molecular and cellular biology of plants. The top 25 papers in our Special Topic on Arabidopsis and Plant Disease Resistance cover a wide variety of research areas within the field. The majority of this collection of papers deals with ways in which to measure or monitor gene structure; chief among these is the top-ranked work of Mark Schena and his colleagues on monitoring gene expression patterns with a novel cDNA microarray. Other methods reported include microsatellite loci, codominant ecotype-specific PCR-based markers, recombinant inbred cell lines, and amplified polymorphic DNA markers. Gene transformation also frequently appears in this listing, as well as the role of the ethylene response gene and its mutations, defense responses of resistant gene-dependent plants, and the actions of resistance gene products. Other areas of note within this collection of papers include studies in dehydration tolerance, blue-light photoreceptors, and photosensory specificity.

Methodology

To construct this database, papers were extracted based on the title- abstract- and author-supplied keywords for Arabidopsis. The keywords used were as follows: arabidopsis.

The baseline time span for this database is 1992 - 2002. The resulting database contained 18,180 papers; 29,339 authors; 83 countries; 722 journals; and 3,272 institutions.

Rankings

Once the database was in place, it was used to generate the lists of top 25 papers, authors, journals, institutions, and nations, covering a time span of 1992 - 2002.

The top 25 papers are ranked according to total cites. Rankings for author, journal, institution, and country are listed in three ways: according to total cites, total papers, and total cites/paper. The paper thresholds used to determine scientist, institution, country, and journal rankings according to total cites/paper were as follows: 26, 35, 33, and 26, respectively.

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