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ESI Special
Topics: February 2007
Citing URL: http://esi-topics.com/pancan/interviews/ScottKern.html |
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An INTERVIEW with Dr. Scott Kern
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his
month, Special Topics talks with Dr. Scott Kern about his
highly cited work on pancreatic cancer. According to our
analysis of pancreatic cancer research published in the past
decade, Dr. Kern’s work ranks at #3, with 78 qualifying
papers cited a total of 5,859 times to date. Five of these
papers are also ranked in the list of the top 20 papers,
including the #1 paper, "DPC4, a candidate tumor
suppressor gene at human chromosome 18Q21.1" (Hahn SA, et
al., Science 271[5247]:350-3, 19 January 1996). In
Essential
Science Indicators ,
Dr. Kern’s record includes 146 papers, the majority of which
are in the field of Clinical Medicine, cited a total of 8,231
times to date. Dr. Kern is Professor of Oncology and Professor
of Pathology at the Johns Hopkins University School of
Medicine’s Sidney Kimmel Comprehensive Cancer Center in East
Baltimore, Maryland.
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Would
you please tell us a little about your educational background and
early research interests?
The TIME magazine cover of March 19, 1973 featured immunologist
Robert Good, with the title "Toward Control of Cancer." In
1977, I left high school to enter the six-year combined
undergraduate-medical track at the University of Michigan, having
told the interviewer that I wanted to do something along the lines
of Robert Good, using a scientific discovery to design treatments.
Three years later I volunteered to work during the summer break
in the mucosal immunology lab run by a class favorite,
gastrointestinal pathologist Dr. David Keren. I continued to work on
this research off and on for the next seven years, and I stayed for
residency in pathology to work with him and with the expert and
entertaining GI pathologist, Henry Appelman. Dave had trained
earlier at Hopkins under one of the founders of GI pathology, Dr.
John Yardley, and alongside fellow trainee Dr. Stanley Hamilton; I
eventually took a fellowship in GI pathology to train with Dr.
Yardley and Stan. Before I left for Hopkins, a recent Hopkins
arrival and molecular geneticist at Michigan, Andy Feinberg, told
me, "When you get there, look up a guy named Bert
Vogelstein [see
also].
He's kind of young, but I think he's very good."
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“Pancreas cancers are highly resistant to virtually all forms of chemotherapy. This is especially unfortunate, since surgery alone will not provide a true cure for the disease.”
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When I arrived in Baltimore, I learned that the GI path group was
working closely with Bert. I began working on the clinical
correlation of specific chromosomal defects with the appearance and
behavior of colorectal adenomas and cancers. Within a little over a
year, I joined Bert's lab group for a term of three years. I worked
mostly on the biochemistry of the p53 protein. When I formed my own
research lab in 1992, I had never sequenced a gene to look for
mutations, and I had to do some catching up while studying the
mutation patterns found in my own research interest,
colitis-associated dysplasia.
How
did you come to focus on pancreatic cancer, and on pancreatic cancer
genetics in particular?
Interestingly, a chance encounter of my chairman (now Dr.
Yardley) with the chair of surgery (Dr. John Cameron) on a
cross-country flight proved the most influential. Dr. Cameron
alerted Dr. Yardley that the number of pancreatic cancer resections
was about to skyrocket at our institution due to surgical advances.
He forcefully asked why there were no molecular biologists waiting
to take advantage of it. Dr. Yardley put a bug in my ear and also
into that of Dr. Ralph Hruban, a new faculty member in pathology.
Ralph and I spoke briefly in the hall and talked in general terms
about possible future studies. Dr. Cameron passed the same
enthusiasm on to a young surgeon, Dr. Charles Yeo.
Charlie established a multidisciplinary group that has met
bimonthly since 1991. At first, we had not much to talk about.
Charlie soon submitted a grant occasioned by a
special surgical RFA (request for applications) that
provided half a technician's salary for Ralph and me,
which we used to bootstrap our studies of pancreatic cancer. The
McDonnell Foundation, upon the recommendation of our Cancer
Center, awarded the money needed to properly set up my lab and
do the preliminary studies. We obtained a SPORE (Specialized Program
of Research Excellence) grant in 1993 on the subject. Over the
past 13 years, Ralph and I have used the SPORE grant, the
strengths of our surgeons, and many, many talented collaborators to
foster new careers and productive research in pancreatic cancer.
Tell
us about your DCP4 research—how did it start, what have been the
major findings and/or implications, and has DCP4 been exhausted as a
resource of information yet?
For the first few months upon entering Bert's lab, I joined the
ongoing mapping of a locus on chromosomal arm 18q. Eric Fearon, a
brilliant graduate student of Bert, had found a homozygous
deletion there. We all were familiar with the story of the
retinoblastoma gene having been found as the target of homozygous
deletions. Conceptually, the genes found within the boundaries of a
homozygous deletion were candidate tumor-suppressor genes, and
homozygous deletions were thought otherwise to be rare. The DCC gene
was the only gene identified within the deletion, and the published
report became a citation classic.
Subsequent sequencing of the gene as published by the original
lab and others, however, yielded few mutations. People make their
own conclusions from data, but many investigators found that DCC
raised as many questions as it answered. Nonetheless, herd mentality
sometimes takes hold of the literature (see our discussion in Cancer
Biol. Ther. 3:903-910, 2004), and most of the citing authors
referred solely to the initial finding of DCC rather than to the
subsequent and brutally honest report of the low mutation rate by
the same group. The citations also omitted the fact, although
described in the initial paper, that one end of the homozygous
deletion had not been mapped (due to having run out of tumor
tissues). Thus, the full gene content of the 18q deletion was still
unknown.
It took a series of failed strategies before my lab could readily
study the deletion patterns in pancreatic cancer, but we finally
found that growing the patient's tumor in mice, as a xenograft, was
fruitful. Even after multiple passages, the tumors remained
incredibly faithful to the patterns of mutations found in the
patient's initial tumor. Stephan Hahn, a postdoctoral fellow in my
lab provided by Wolf Schmiegel and funded by the Deutsche
Forschungsgemeinschaft, decided to study chromosome 18q with every
marker he could obtain—even 100 markers if needed (which was a lot
back then). Although this was a fairly unbiased approach, after only
about 23 markers he had found a hotspot of homozygous deletions in a
very familiar place. They clustered on the very side of DCC on which
the earlier mapping had not been completed. Nearly a third of all
the pancreatic cancers had these deletions. Toward the end of this
project, the NIH wrote us to inform us that the study section rated
our approach as fundamentally flawed and within the bottom 50% of
applications. They explained that the proposal was not a
significant improvement over the prior grant we had submitted
concerning the localization of BRCA2, at a locus we termed
DPC1/DPC2, for Deleted in Pancreatic Carcinoma at loci 1 and 2.
Only months later, we published the 18q gene in Science.
We termed it DPC4, for it was found at homozygously
deleted locus 4. DPC4, now known officially as
SMAD4, had both homozygous deletions and intragenic
mutations expected to inactivate the gene. Based on
sequence-similarity, we proposed that it mediated signals similar to
the Mad genes of Drosophila and the TGFbeta-like signals of
vertebrates. The report became the most-cited cancer research paper
of 1996. About the same time, the BRCA2 gene was cloned by our
collaborators in the UK and in Utah who were using our inside
information from the deletion boundaries we were defining. The
journal Science reported this news accompanied by a map—the
same map of the pancreas cancer homozygous deletion on chromosome
13q that had twice failed to impress the expert panel of NIH
reviewers.
It is important to recognize that the surgeons, pathologists, our
Cancer Center, Dr. Schmiegel, the McDonnell Foundation, and the NIH
SPORE system recognized the importance of this translation of
research that bridged the clinic and the lab bench. I have since
repeatedly observed that translational science can
be mishandled by the standard NIH review system operated by CSR
(Center for Scientific Review) and by some levels of the
NCI. Scientists do not always agree on what is valuable.
DPC4/SMAD4 was subsequently applied to clinical, basic science,
and translational uses. With collaborators, we found a family of
other Smad genes in humans, and we found a DNA sequence bound by
DPC4/SMAD4, establishing it as a transcription factor and permitting
functional assays and the identification of genes downstream of and
directly regulated by DPC4/SMAD4. DPC4/SMAD4 was identified to
be the cause of the inherited syndrome, juvenile polyposis. Further
study of DPC4/SMAD4 emphasized its role in transmitting signals from
TGFbeta, activin, and bone morphogenic protein receptors.
Owing to this realization, we found tumor mutations in the
TGFbeta receptor type I and activin receptor types I and
II played a role in pancreatic tumorigenesis. Mutations in a
BMP receptor were found to be another cause of juvenile polyposis.
Engineered knockouts of DPC4/SMAD4 showed it to play a role in
vertebrate development. An immunohistochemical assay for DPC4/SMAD4
loss in tumorigenesis confirmed the causative relation of precursor
lesions to the invasive cancers in the pancreas. The same assay now
provided a clinically useful assay to identify cancer in otherwise
difficult and small clinical biopsies of pancreatic masses. The
lessons from the mapping of the DPC4 homozygous deletions were
applied successfully in the cloning of other tumor-suppressor genes,
including PTEN, by colleagues.
It
is mentioned in several of your papers that one of the challenges in
pancreatic cancer is that it is usually difficult to detect until it
is in an advanced stage. Will any of your findings bring us closer to
earlier detection?
Pancreas cancer remains difficult to diagnose in an asymptomatic
stage. Once symptoms occur, the tumor is almost invariably at a
fatal stage, having created distant micro-metastases. Our studies of
mutations in the precursor lesions in the pancreas have fleshed out
a model, which in turn conveys some hope. In this model, the
most important precursor lesions arise in the ducts in adulthood and
a minority progress over a period of decades to become the more
aggressive forms of the precursor and eventually invade to
constitute the lethal stage, ductal cancer. It is likely, however,
that high-grade precursor lesions probably exist for some years
before the stage of invasion and metastasis. This intermediate
stage provides an opportunity for surgical removal at a
potentially curable stage.
Patients in high-risk families can now be enrolled in an
early-detection screening program that, while experimental, has
identified early cancerous lesions in asymptomatic patients. In
the highest-risk families, nearly 18% were found to have inherited
mutations in BRCA2, allowing us to inform the families of the
precise reason for their affliction. Other inherited gene mutations
are also now known to cause pancreatic cancer as well, although
BRCA2 remains the most common known cause.
As introduced above, difficult biopsies are now studied
immunohistochemically for markers of pancreatic cancer, permitting a
firm diagnosis where, only a few years ago, additional
diagnostic techniques might have been required and delayed the
institution of appropriate therapy. Some of the proteins found to be
overexpressed in pancreatic cancer have reached a practical stage of
clinical evaluation, including ongoing clinical trials of antibody
therapy against specific surface proteins, development and human
testing of a post-surgically administered cancer cell vaccine that
is now shown to generate immune responses in the patients against
tumor-specific proteins, and active development of new immunologic
agents designed to elicit more direct immune responses against the
same tumor markers.
In experimental trials, the treatment of ductal cancer is now
taking advantage of genetic signatures of the cancer cells for which
one would expect a high responsiveness of the tumor cells to
specific and available drugs. For example, mutations in the BRCA2
gene and the BRCA2 cellular pathway are being used investigationally
to assign individual patients to specific families of drugs, or to
explain the different responses of individual patients to such
drugs.
Our genetic studies also identified subsets of tumors which
appeared not to follow the usual patterns of mutations. One major
subset was subsequently recognized as a new diagnostic
classification of pancreatic cancer, the medullary cancers. This
subtype is genetically, histologically, and clinically different
from the pancreatic cancer with which it was previously classified.
Describe
the course of your research on family history and pancreatic cancer.
Are there particular characteristics or phenomena that make pancreatic
cancer different from other malignancies in this regard?
Pancreas cancer is unique in a numbers of features. Most
strikingly for the researcher is the characteristic desmoplastic, or
scarring, reaction of the normal tissues to the cancer cells within
the tumor. Thus, the majority of the tumor volume comes from the
non-cancerous reaction. This impairs the study of pancreas cancer
biology, for the cancer cells within a pancreas cancer must often be
separated from the normal tissues prior to study; this was the
advance provided by xenografting the tumors to mice in order to
facilitate genetic analysis.
Pancreas cancer also engenders systemic effects which seem
exaggerated in relation to the volume of the tumor itself; these
include cachexia, loss of appetite, malaise, and weight loss, and
suggest the presence of a circulating factor released by the cancer
cells or by the body's reaction to the cancer cells.
Pancreas cancers are highly resistant to virtually all forms of
chemotherapy. This is especially unfortunate, since surgery alone
will not provide a true cure for the disease. In contrast, half of
colorectal cancers are cured by surgical steel alone, and more than
half of breast cancers are also.
Radiographic imaging cannot distinguish the cancers from the
density of the surrounding normal tissue, and cannot distinguish the
cancer reaction from a benign pancreatitis. Thus, the cancers are
not readily screened by external imaging. A moderately invasive
procedure, endoscopy, is required to see the disease in its early
forms, before it has become large and its spread has become
clinically apparent.
The mortality of pancreas cancer is about 33,000, just a hair
behind breast cancer,
which kills about 41,000 in the U.S. annually. Yet research funding
for pancreatic cancer is relatively minor when compared to other
major cancer killers. There are still extremely few research
scientists studying pancreas cancer full-time.
Unlike breast and other cancers, pancreatic cancer is rather
homogeneous genetically. Nearly all have a mutation in the p16 gene,
over 90% mutate the KRAS gene, 75% mutate the p53 gene, and just
over 50% inactivate DPC4/SMAD4. These rates are all among the
highest seen in any malignancy, and many pancreas cancers have
mutated all four genes. This severity of the genotype may, if we be
allowed to speculate, explain the severity of the clinical course.
Perhaps no other cancer is genetically as "screwed up."
Although about 95% of the cells of a normal pancreas are "acinar,"
meaning that they produce digestive enzymes, well over 90% of the
cancers are of ductal cell type. Thus, research comparisons of
pancreatic cancer cells to "normal pancreas" are seldom of
any value! This fact continues to amaze and even accost those of us
in this field. This fact has greatly impaired the speed of research
and impairs the value even of some of the published studies.
Scott E. Kern, M.D.
Sidney Kimmel Comprehensive Cancer Center
Johns Hopkins University School of Medicine
East Baltimore, MD, USA
| Dr. Scott Kern's
most-cited paper with 1,255 cites to date: |
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Hahn, SA, et
al., "DPC4, a candidate tumor suppressor gene at
human chromosome 18q21.1," Science 271, 350-3,
1996. Source:
Essential Science Indicators. |
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ESI Special
Topics: February 2007
Citing URL: http://esi-topics.com/pancan/interviews/ScottKern.html
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